get_expression: Visualize gene expression spatially
In ivykos/seuratplusvisium: Visualizing Seurat Cluster Labels on Visium Tissue Slides
View source: R/functions_new.R
get_expression R Documentation
Visualize gene expression spatially
Description
This function visualizes the expression of a gene of interest on a Visium tissue slide. Note this does not yet
work for SeuratObjects made of merged datasets.
Usage
get_expression(obj, "SeuratProject", "Cx3cr1", "tissue_position_list.csv")
Arguments
seuratObj
proj
feature
tissue_csv
ivykos/seuratplusvisium documentation built on July 27, 2022, 10:26 p.m.
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View source: R/functions_new.R
| get_expression | R Documentation |
Visualize gene expression spatially
Description
This function visualizes the expression of a gene of interest on a Visium tissue slide. Note this does not yet work for SeuratObjects made of merged datasets.
Usage
get_expression(obj, "SeuratProject", "Cx3cr1", "tissue_position_list.csv")
Arguments
seuratObj |
|
proj |
|
feature |
|
tissue_csv |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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