README.md

In izarvillasante/SCNA: What the Package Does (One Line, Title Case)

SCNA

This repository contains all the supplementary files and/or R code to generate all the data used in the article: “Refinement of computational identification of somatic copy number alterations using DNA methylation microarrays illustrated in cancers of unknown primary”.

cnv.methyl Package:

cnv.methyl package has been created in order to collect and share all the functions and code used for the pipline. It is written fully in R and you can install the development version from GitHub with:

# install.packages("devtools")
devtools::install_github("https://github.com/ijcBIT/cnv.methyl.git")

Examples:

You can follow the “Manual.Rmd” document with walk-through examples of all the different steps in the pipline.

izarvillasante/SCNA documentation built on May 20, 2022, 12:03 p.m.