| assign_to_global | function loading results in global environment |
| ex_data | This is the longitudinal genetic dataset. |
| func1 | An internal function to compute m and gamma based on... |
| get.column.index | An internal function to obtain column index by its name |
| getNextY.cont | An internal function to compute next Y based on... |
| getNextY.cont2 | An internal function to compute next value of physiological... |
| getNextY.discr | An internal function to compute the next value of... |
| getNextY.discr.m | An internal function to compute next m based on dicrete-time... |
| getPrevY.discr | An internal function to compute previous value of... |
| getPrevY.discr.m | An internal function to compute previous m based on... |
| longdat | This is the longitudinal dataset. |
| LRTest | Likelihood-ratio test |
| m | An internal function to compute m from |
| make.short.format | An internal function which construct short data format from a... |
| mu | An internal function to compute mu |
| prepare_data | Data pre-processing for analysis with stochastic process... |
| prepare_data_cont | Prepares continuouts-time dataset. |
| prepare_data_discr | Prepares discrete-time dataset. |
| sigma_sq | An internal function to compute sigma square analytically |
| simdata_cont | Multi-dimensional simulation function for continuous-time... |
| simdata_discr | Multi-dimension simulation function |
| simdata_gamma_frailty | This script simulates data using familial frailty model. We... |
| simdata_time_dep | Simulation function for continuous trait with time-dependant... |
| sim_pobs | Multi-dimension simulation function for data with partially... |
| spm | A central function that estimates Stochastic Process Model... |
| spm_con_1d | Fitting a 1-D SPM model with constant parameters |
| spm_con_1d_g | Fitting a 1-D genetic SPM model with constant parameters |
| spm_continuous | Continuous multi-dimensional optimization |
| spm_cont_lin | Continuous multi-dimensional optimization with linear terms... |
| spm_cont_quad_lin | Continuous multi-dimensional optimization with quadratic and... |
| spm_discrete | Discrete multi-dimensional optimization |
| spm.impute | Multiple Data Imputation with SPM |
| spm_pobs | Continuous-time multi-dimensional optimization for SPM with... |
| spm_projection | A data projection with previously estimated or user-defined... |
| spm_time_dep | A function for the model with time-dependent model... |
| stpm | Stochastic Process Model for Analysis of Longitudinal and... |
| trim | Returns string w/o leading or trailing whitespace |
| trim.leading | Returns string w/o leading whitespace |
| trim.trailing | Returns string w/o trailing whitespace |
| vitstat | Vital (mortality) statistics. |
