Files in jacobbien/simulator
An Engine for Running Simulations

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/add-to-simulation.R R/aggregator-class.R R/component-class.R R/create.R R/draws-class.R R/draws.R R/evals-class.R R/evaluate.R R/examples.R R/extended-method-class.R R/get-from-simulation.R R/import_from.R R/load.R R/manage.R R/method-class.R R/method-extension-class.R R/methods.R R/metric-class.R R/model-class.R R/models.R R/output-class.R R/parallel-draws.R R/parallel-methods.R R/parallel.R R/plot_eval.R R/plot_eval_by.R R/plot_evals.R R/reference-classes.R R/simulation-class.R R/tables.R R/utils.R R/zzz.R README.Rmd README.md
_pkgdown.yml
docs/.nojekyll
docs/404.html
docs/articles/elastic-net.html
docs/articles/elastic-net_files/figure-html/unnamed-chunk-5-1.png
docs/articles/elastic-net_files/figure-html/unnamed-chunk-6-1.png
docs/articles/elastic-net_files/figure-html/unnamed-chunk-7-1.png
docs/articles/elastic-net_files/figure-html/unnamed-chunk-9-1.png
docs/articles/fdr.html
docs/articles/fdr_files/figure-html/unnamed-chunk-10-1.png
docs/articles/fdr_files/figure-html/unnamed-chunk-11-1.png
docs/articles/fdr_files/figure-html/unnamed-chunk-12-1.png
docs/articles/fdr_files/figure-html/unnamed-chunk-13-1.png
docs/articles/index.html
docs/articles/james-stein.html
docs/articles/james-stein_files/figure-html/unnamed-chunk-10-1.png
docs/articles/james-stein_files/figure-html/unnamed-chunk-12-1.png
docs/articles/james-stein_files/figure-html/unnamed-chunk-13-1.png
docs/articles/james-stein_files/figure-html/unnamed-chunk-17-1.png
docs/articles/james-stein_files/figure-html/unnamed-chunk-18-1.png
docs/articles/james-stein_files/figure-html/unnamed-chunk-19-1.png
docs/articles/james-stein_files/figure-html/unnamed-chunk-6-1.png
docs/articles/lasso.html
docs/articles/lasso_files/figure-html/unnamed-chunk-11-1.png
docs/articles/lasso_files/figure-html/unnamed-chunk-12-1.png
docs/articles/lasso_files/figure-html/unnamed-chunk-16-1.png
docs/articles/lasso_files/figure-html/unnamed-chunk-5-1.png
docs/articles/lasso_files/figure-html/unnamed-chunk-6-1.png
docs/articles/lasso_files/figure-html/unnamed-chunk-9-1.png
docs/articles/simulator.html
docs/authors.html
docs/deps/bootstrap-5.2.2/bootstrap.bundle.min.js
docs/deps/bootstrap-5.2.2/bootstrap.bundle.min.js.map
docs/deps/bootstrap-5.2.2/bootstrap.min.css
docs/deps/data-deps.txt
docs/deps/jquery-3.6.0/jquery-3.6.0.js
docs/deps/jquery-3.6.0/jquery-3.6.0.min.js
docs/deps/jquery-3.6.0/jquery-3.6.0.min.map
docs/index.html
docs/link.svg
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/Aggregator-class.html
docs/reference/Component.html
docs/reference/Draws-class.html
docs/reference/DrawsRef-class.html
docs/reference/Evals-class.html
docs/reference/EvalsRef-class.html
docs/reference/ExtendedMethod-class.html
docs/reference/Method-class.html
docs/reference/MethodExtension-class.html
docs/reference/Metric-class.html
docs/reference/Model-class.html
docs/reference/ModelRef-class.html
docs/reference/Output-class.html
docs/reference/OutputRef-class.html
docs/reference/Rplot001.png
docs/reference/Simulation.html
docs/reference/add.html
docs/reference/add_bold.html
docs/reference/add_dref_to_list.html
docs/reference/add_eref_to_list.html
docs/reference/add_oref_to_list.html
docs/reference/aggregate_evals.html
docs/reference/as.data.frame.Evals.html
docs/reference/as.data.frame.Model.html
docs/reference/as.data.frame.listofEvals.html
docs/reference/as.data.frame.listofModels.html
docs/reference/cash-Model-method.html
docs/reference/catsim.html
docs/reference/create.html
docs/reference/describe.html
docs/reference/do_in_parallel.html
docs/reference/draws.html
docs/reference/evals.html
docs/reference/evaluate.html
docs/reference/evaluate_internal.html
docs/reference/evaluate_single.html
docs/reference/figures/simulator-hex3.png
docs/reference/generate_model.html
docs/reference/get_contents.html
docs/reference/get_files_not_in_simulations.html
docs/reference/get_model_indices.html
docs/reference/get_relative_path.html
docs/reference/get_simulation_with_all_files.html
docs/reference/ggplot_eval.html
docs/reference/grapes-greater-than-grapes.html
docs/reference/index.html
docs/reference/load-DrawsRef-method.html
docs/reference/load-EvalsRef-method.html
docs/reference/load-ModelRef-method.html
docs/reference/load-OutputRef-method.html
docs/reference/load-list-method.html
docs/reference/load_draws.html
docs/reference/load_evals.html
docs/reference/load_libraries_on_cluster.html
docs/reference/load_model.html
docs/reference/load_outputs.html
docs/reference/load_simulation.html
docs/reference/make_my_example_model.html
docs/reference/memory_as_string.html
docs/reference/model.html
docs/reference/model_names.html
docs/reference/models_as_data.frame.html
docs/reference/my_example_loss.html
docs/reference/my_example_method.html
docs/reference/new_aggregator.html
docs/reference/new_extended_method.html
docs/reference/new_method.html
docs/reference/new_method_extension.html
docs/reference/new_metric.html
docs/reference/new_model.html
docs/reference/new_simulation.html
docs/reference/output.html
docs/reference/outputs_or_evals.html
docs/reference/plot_eval.html
docs/reference/plot_eval_by.html
docs/reference/plot_evals.html
docs/reference/plus-ExtendedMethod-MethodExtension-method.html
docs/reference/plus-Method-MethodExtension-method.html
docs/reference/plus-list-MethodExtension-method.html
docs/reference/recycle.html
docs/reference/relabel.html
docs/reference/rename.html
docs/reference/run_extendedmethod_single.html
docs/reference/run_extmethod_parallel.html
docs/reference/run_method.html
docs/reference/run_method_parallel.html
docs/reference/run_method_single.html
docs/reference/save_simulation.html
docs/reference/simulate_from_model.html
docs/reference/simulate_from_model_single.html
docs/reference/simulate_parallel.html
docs/reference/subset_evals.html
docs/reference/subset_models.html
docs/reference/subset_simulation.html
docs/reference/tabulate_eval.html
docs/search.json
docs/sitemap.xml
inst/CITATION
man/Aggregator-class.Rd man/Component.Rd man/Draws-class.Rd man/DrawsRef-class.Rd man/Evals-class.Rd man/EvalsRef-class.Rd man/ExtendedMethod-class.Rd man/Method-class.Rd man/MethodExtension-class.Rd man/Metric-class.Rd man/Model-class.Rd man/ModelRef-class.Rd man/Output-class.Rd man/OutputRef-class.Rd man/Simulation.Rd man/add.Rd man/add_bold.Rd man/add_dref_to_list.Rd man/add_eref_to_list.Rd man/add_oref_to_list.Rd man/aggregate_evals.Rd man/as.data.frame.Evals.Rd man/as.data.frame.Model.Rd man/as.data.frame.listofEvals.Rd man/as.data.frame.listofModels.Rd man/cash-Model-method.Rd man/catsim.Rd man/create.Rd man/describe.Rd man/do_in_parallel.Rd man/draws.Rd man/evals.Rd man/evaluate.Rd man/evaluate_internal.Rd man/evaluate_single.Rd
man/figures/simulator-hex3.png
man/generate_model.Rd man/get_contents.Rd man/get_files_not_in_simulations.Rd man/get_model_indices.Rd man/get_relative_path.Rd man/get_simulation_with_all_files.Rd man/ggplot_eval.Rd man/grapes-greater-than-grapes.Rd man/load-DrawsRef-method.Rd man/load-EvalsRef-method.Rd man/load-ModelRef-method.Rd man/load-OutputRef-method.Rd man/load-list-method.Rd man/load_draws.Rd man/load_evals.Rd man/load_libraries_on_cluster.Rd man/load_model.Rd man/load_outputs.Rd man/load_simulation.Rd man/make_my_example_model.Rd man/memory_as_string.Rd man/model.Rd man/model_names.Rd man/models_as_data.frame.Rd man/my_example_loss.Rd man/my_example_method.Rd man/new_aggregator.Rd man/new_extended_method.Rd man/new_method.Rd man/new_method_extension.Rd man/new_metric.Rd man/new_model.Rd man/new_simulation.Rd man/output.Rd man/outputs_or_evals.Rd man/plot_eval.Rd man/plot_eval_by.Rd man/plot_evals.Rd man/plus-ExtendedMethod-MethodExtension-method.Rd man/plus-Method-MethodExtension-method.Rd man/plus-list-MethodExtension-method.Rd man/recycle.Rd man/relabel.Rd man/rename.Rd man/run_extendedmethod_single.Rd man/run_extmethod_parallel.Rd man/run_method.Rd man/run_method_parallel.Rd man/run_method_single.Rd man/save_simulation.Rd man/simulate_from_model.Rd man/simulate_from_model_single.Rd man/simulate_parallel.Rd man/subset_evals.Rd man/subset_models.Rd man/subset_simulation.Rd man/tabulate_eval.Rd
simulator.Rproj
tests/testthat.R tests/testthat/test-create.R tests/testthat/test-draws.R tests/testthat/test-evaluate.R tests/testthat/test-method-extension.R tests/testthat/test-method.R tests/testthat/test-models.R tests/testthat/test-parallel.R tests/testthat/test-regex.R tests/testthat/test-simulation.R tests/testthat/test-simulator.files.R tests/testthat/test-table.R tests/testthat/test-utils.R vignettes/elastic-net.Rmd vignettes/elastic-net/eval_functions.R vignettes/elastic-net/main.R vignettes/elastic-net/method_functions.R vignettes/elastic-net/model_functions.R vignettes/false-discovery-rate/eval_functions.R vignettes/false-discovery-rate/main.R vignettes/false-discovery-rate/method_functions.R vignettes/false-discovery-rate/model_functions.R vignettes/fdr.Rmd vignettes/james-stein.Rmd vignettes/james-stein/eval_functions.R vignettes/james-stein/main.R vignettes/james-stein/method_functions.R vignettes/james-stein/model_functions.R vignettes/lasso.Rmd vignettes/lasso/eval_functions.R vignettes/lasso/main.R vignettes/lasso/method_functions.R vignettes/lasso/model_functions.R vignettes/simulator.Rmd
jacobbien/simulator documentation built on Feb. 4, 2023, 1:03 p.m.