Man pages for jacobbien/trac
Tree-based Aggregation of Compositional Data

aggregate_to_levelAggregate data to a fixed level
cv_sparse_log_contrastPerform cross validation for tuning parameter selection for...
cv_tracPerform cross validation for tuning parameter selection
phylo_to_AConvert from phylo to the A matrix used in trac. Note this...
plot_cv_tracMake a plot of the output of cv_trac
plot_trac_pathPlot trac coefficient path
predict_tracMake predictions based on a trac fit
refit_sparse_log_contrastRefit subject to sparsity constraints
refit_tracRefit subject to sparsity constraints
sCD14sCD14 data
sparse_log_contrastPerform sparse log-contrast regression
tax_table_to_phyloConvert a tax table to a phylo object
tracPerform tree-based aggregation
jacobbien/trac documentation built on Oct. 18, 2021, 9:30 p.m.