jacquekane/phyloderiv: An implementation of the Phylogenetic Derivative

An implementation of the phylogenetic derivative. It implements functions for reading phylogenetic trees (MS trees from Hudson), Blossoc trees, and RENT+ trees. It also implements functions for computing the phylogenetic derivative and computing the distances between trees from two lists at the same indices. Distance measurements include Robinson-Foulds and path interval.

Getting started

Package details

Authorperson("Jacqueline", "Kane", email = "[email protected]", role = c("aut", "cre"))
MaintainerThe package maintainer <[email protected]>
LicenseWhat license is it under?
Version0.1.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("jacquekane/phyloderiv")
jacquekane/phyloderiv documentation built on June 9, 2018, 12:24 a.m.