Man pages for jafarilab/CINNA
Deciphering Central Informative Nodes in Network Analysis
| calculate_centralities | Centrality measure calculation |
| calculate.centralities | Centrality measure calculation |
| cortex | Macaque Visual Cortex Network |
| dangalchev_closeness_centrality | Dangalchev Closeness Centrality |
| drugtarget | Drug Target Network |
| drugTarget | Drug Target Network |
| giant_component_extract | Giant component extraction of a graph |
| giant.component.extract | Giant component extraction of a graph |
| graph_extract_components | Component extraction of a graph |
| graph.extract.components | Component extraction of a graph |
| group_centrality | Group Centrality |
| harmonic_centrality | Harmonic Centrality |
| kangaroo | Kangaroo Network |
| local_bridging_centrality | Local Bridging Centrality |
| misc_extract_components | Component extraction of miscellaneous graph formats |
| misc.extract.components | Component extraction of miscellaneous graph formats |
| pca_centralities | PCA Centrality Measures |
| pca.centralities | Ranking centrality measure based on contributions |
| print.calculate.centralities | Print computed centrality measures results into a file |
| print.visualize.association | Print pairwise association plot among centrality measures... |
| print.visualize.correlations | Print centrality correlation plot |
| print.visualize.dendogram | Print dendrogram plot of a graph |
| print.visualize.dendrogram | Print dendrogram plot of a graph |
| print.visualize.graph | Print visualized based on centrality values graph |
| print.visualize.heatmap | Print the heatmap plot of centrality measures |
| print.visualize.pair.correlation | Print pairwise correlation and histogram plots between two... |
| proper_centralities | Proper centrality measure representation |
| proper.centralities | Proper centrality measure representation |
| rhesus | Moreno Rhesus Network |
| summary_calculate_centralities | Summarize centrality measure calculation results |
| summary.calculate.centralities | Summarize centrality measure calculation results |
| summary_graph_extract_components | Summarize component extraction of a graph |
| summary.graph.extract.components | Summarize component extraction of a graph |
| summary_pca_centralities | Summarize PCA result related to centrality measures |
| summary.pca.centralities | Summarize PCA result related to centrality measures |
| summary_tsne_centralities | Summarize t-Distributed Stochastic Neighbor Embedding (t-SNE)... |
| summary.tsne.centralities | Summarize t-Distributed Stochastic Neighbor Embedding (t-SNE)... |
| tsne_centralities | t-Distributed Stochastic Neighbor Embedding (t-SNE) on... |
| tsne.centralities | t-Distributed Stochastic Neighbor Embedding (t-SNE) on... |
| visualize_association | Pairwise association plot between centrality measures |
| visualize.association | Pairwise association between centrality values |
| visualize_correlations | Correlation plot between centrality measures |
| visualize.correlations | Correlation plot between centrality values |
| visualize.dendogram | Dendrogram visualization based on a specific centrality... |
| visualize_dendrogram | Dendrogram plot among centrality measures |
| visualize_graph | Graph visualization based on a specific centrality measure |
| visualize.graph | Graph visualization based on a specific centrality measure |
| visualize_heatmap | Heatmap plot between centrality measures |
| visualize.heatmap | Heatmap between centrality values |
| visualize_pair_correlation | Pairwise correlation plot between two centrality measures |
| visualize.pair.correlation | Pairwise correlation between two centrality values |
| wiener_index_centrality | Wiener Index Centrality |
| zachary | Zachary Karate Club Network |
