Man pages for jafarilab/CINNA
Deciphering Central Informative Nodes in Network Analysis

calculate_centralitiesCentrality measure calculation
calculate.centralitiesCentrality measure calculation
cortexMacaque Visual Cortex Network
drugtargetDrug Target Network
giant_component_extractGiant component extraction of a graph
giant.component.extractGiant component extraction of a graph
graph_extract_componentsComponent extraction of a graph
graph.extract.componentsComponent extraction of a graph
kangarooKangaroo Network
misc_extract_componentsComponent extraction of miscellaneous graph formats
misc.extract.componentsComponent extraction of miscellaneous graph formats
pca_centralitiesRanking centrality measure based on contributions
pca.centralitiesRanking centrality measure based on contributions
print.calculate.centralitiesPrint computed centrality measures results into a file
print.visualize.associationPrint pairwise association plot among centrality measures...
print.visualize.correlationsPrint centrality correlation plot
print.visualize.dendogramPrint dendrogram plot of a graph
print.visualize.dendrogramPrint dendrogram plot of a graph
print.visualize.graphPrint visualized based on centrality values graph
print.visualize.heatmapPrint the heatmap plot of centrality measures
print.visualize.pair.correlationPrint pairwise correlation and histogram plots between two...
proper_centralitiesProper centrality measure representation
proper.centralitiesProper centrality measure representation
rhesusMoreno Rhesus Network
summary.calculate.centralitiesSummarize centrality measure calculation results
summary.graph.extract.componentsSummarize component extraction of a graph
summary.pca.centralitiesSummarize PCA result related to centrality measures
summary.tsne.centralitiesSummarize t-Distributed Stochastic Neighbor Embedding (t-SNE)...
tsne_centralitiest-Distributed Stochastic Neighbor Embedding (t-SNE) on...
tsne.centralitiest-Distributed Stochastic Neighbor Embedding (t-SNE) on...
visualize_associationPairwise association plot between centrality measures
visualize.associationPairwise association between centrality values
visualize_correlationsCorrelation plot between centrality measures
visualize.correlationsCorrelation plot between centrality values
visualize.dendogramDendrogram visualization based on a specific centrality...
visualize_dendrogramDendrogram plot among centrality measures
visualize_graphGraph visualization based on a specific centrality measure
visualize.graphGraph visualization based on a specific centrality measure
visualize_heatmapHeatmap plot between centrality measures
visualize.heatmapHeatmap between centrality values
visualize_pair_correlationPairwise correlation plot between two centrality measures
visualize.pair.correlationPairwise correlation between two centrality values
zacharyZachary Karate Club Network
jafarilab/CINNA documentation built on May 12, 2019, 8:42 a.m.