find.missing.landmarks: Replace missing landmarks in array

In jakubnowicki/morphoutils: Utility functions for geometric morphometrics

Description

Replaces missing landmarks in array with NA. Based on k-means clustering, seeks for separated group of landmarks (for example you can put all missing landmarks in the corner of the picture). Also handles with tpsdig way of writing missing andmarks (-1, -1). Also can clear specimens IDs.

Usage

find.missing.landmarks(data, method = "clust", clear.names = FALSE,
  split = "\\", clust.parameter = 0.45)

Arguments

data	landmark array
method	clustering method
clear.names	optional bolean for clearing specimens IDs; default = FALSE
split	optional split pattern for clearing IDs (directory mark); default = '\'
clust.parameter	minimal proportion of missed landmarks in 'clust method; deafult = 0.45

jakubnowicki/morphoutils documentation built on May 18, 2019, 11:17 a.m.