calc_DIC | DIC calculation |
calculate_BIC | BIC calculation |
calculate_WAIC | WAIC calculation |
ess_diagnostics | Check ESS |
estimate_mode | Calculate mode |
gelman_diagnostics | Check gelman diagnostics |
generate_start_tab | Generate starting parameter table |
get_best_pars | Get maximum likelihood parameters |
get_index_pars | Get parameters based on index |
lazymcmc | MCMC for the lazy |
load_mcmc_chains | Read in MCMC chains |
mcmc_param_check | MCMC chain parameter check |
median.quantile | Find median |
mvr_proposal | Multivariate proposal function |
param_table_check | Model parameter table check |
plot_single_chain | Density and iteration plot single chain |
protect | Protect function |
run_MCMC | Adaptive Metropolis-within-Gibbs Random Walk Algorithm. |
scaletuning | Scale step sizes |
summarise_chain | Summarise MCMC chain statistics |
univ_proposal | MCMC proposal function |
univ_proposal_normal | MCMC proposal function - univariate normal |
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