jamesliley/cFDR-common-controls: Estimation of the Bayesian conditional false discovery rate (cFDR) allowing shared controls

Computes the pleiotropy-informed Bayesian conditional false discovery rate (cFDR) as described in Andreasson (2013) and Liley (2015) allowing for sharing of controls between GWAS. Also computes the associated false-discovery rate amongst SNPs for which cFDR is less than some cutoff.

Getting started

Package details

AuthorJames Liley
MaintainerJames Liley <ajl88@cam.ac.uk>
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
jamesliley/cFDR-common-controls documentation built on May 18, 2019, 11:21 a.m.