parade_summary: Summarise residual information in a diagnostic parade per...

In janhove/cannonball: Tools for Teaching Statistics

Summarise residual information in a diagnostic parade per cell or per unique predictor value

Description

This function takes the output of the parade function and summarises the residuals (and the fitted values) for each unique combination of variables. This may be useful when checking the constant-variance assumption but the nature of the data is such that plotting the raw residuals will make them stand out from the distractor plots even if non-constant variance isn't much of a problem. Feed the output of this function to var_plot to obtain a quick diagnostic plot for the constant-variance assumption.

I think parade_summary is mostly useful when dealing with fairly discrete outcome data, so the function will throw a warning if the outcome data seem fairly continuous. (Arbitrarily when there are more than 20 unique outcome values.) It will also throw a warning when the non-outcome data used to define the cells aren't categorical or when the number of observations per cell seems low (arbitrarily fewer than 5 observations).

The assignment of cells in the design to cell numbers in the parade summary is random. That is, one particular predictor combination may be associated with Cell 3 when running 'parade_summary()' one time, but with Cell 1 when running it a second time. Within a given parade summary, however, the same cell number always refers to the same combination of predictor combinations.

Usage

parade_summary(parade, predictors_only = FALSE)

Arguments

parade

The name of an object generated using the parade() function.

predictors_only

If you supplied a dataset to the full_data argument in the parade() call, parade_summary() will by default compute mean fitted values and a host of residual summaries for each unique combination of all the non-outcome variables in this dataset. To override this behaviour, set predictors_only to FALSE; this causes parade_summary() to only compute mean fitted values and residual summaries for each unique combination of the predictors that are actually in the model.

Examples

# Fit model
m <- lm(mpg ~ gear, data = mtcars)

# Generate parade
my_parade <- parade(m)

# Summarise residuals by cell -
# you'll get some warnings. The second one
# because 'gear' is represented as a numeric variable.
my_sum_parade <- parade_summary(my_parade)

# Draw plot
var_plot(my_sum_parade)

reveal(my_sum_parade)
# or
reveal(my_parade)

janhove/cannonball documentation built on Feb. 19, 2025, 5:13 a.m.