tau_leap: Performs tau-leaped simulations

Description Usage Arguments Value Author(s)

Description

Performs tau-leaped simulations

Usage

1
tau_leap(sys, n = 1, tau = 1, while.max = 1000, engine = "C")

Arguments

sys

a list defining a stochastic chemical kinetic system

n

an integer defining the number of time-points to simulate

tau

a positive vector defining the times between observations

while.max

at each time point the maximum number of simulations to try to ensure non-negativity of all species

engine

use 'R' or 'C'

Value

a list containing the species counts at each time point ('X') which is an (n+1) x s matrix and the number of transitions between each time point ('nr') which is an n x r matrix

Author(s)

Jarad Niemi niemi@iastate.edu


jarad/tlpl documentation built on May 18, 2019, 3:46 p.m.