functionalEnrichment: functionalEnrichment

In jasenfinch/riches: Strucutral and Functional Enrichment Analyses

Description

Functional enrichment.

Usage

functionalEnrichment(analysis, assignment, parameters)

## S4 method for signature 'Analysis,Assignment,EnrichmentParameters'
functionalEnrichment(analysis, assignment, parameters)

Arguments

analysis	S4 object of class Analysis
assignment	S4 object of class Assignment
parameters	S4 object of class EnrichmentParameters

Examples

## Not run: 
## Generate enrichment parameters
parameters <- enrichmentParameters('bdi')

## Select only "diffusion" enrichment
functional(parameters) <- list(methods = 'diffusion')

## Run functional enrichment
fe <- functionalEnrichment(example_analysis,example_assignment,parameters)

## End(Not run)

jasenfinch/riches documentation built on April 26, 2021, 1:32 a.m.