Files in jaspershen/lipidflow
What the Package Does (One Line, Title Case)
.DS_Store
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
NEWS
NEWS.md
R/attach.R
R/get_IS_RT.R
R/get_absolute_quantification.R
R/get_lipid_absolute_quantification.R
R/get_relative_quantification.R
R/integrate_peak_area.R
R/lipidflow_logo.R
R/organize_results.R
R/output_result.R
R/reorganize_peak_plot.R
R/utilities.R
R/zzz.R
README.Rmd
README.md
_pkgdown.yml
docs/404.html
docs/LICENSE-text.html
docs/README2.html
docs/apple-touch-icon-120x120.png
docs/apple-touch-icon-152x152.png
docs/apple-touch-icon-180x180.png
docs/apple-touch-icon-60x60.png
docs/apple-touch-icon-76x76.png
docs/apple-touch-icon.png
docs/articles/absolute_quantification.html
docs/articles/absolute_quantification_files/header-attrs-2.6/header-attrs.js
docs/articles/contact_us.html
docs/articles/contact_us_files/Proj4Leaflet-1.0.1/proj4-compressed.js
docs/articles/contact_us_files/Proj4Leaflet-1.0.1/proj4leaflet.js
docs/articles/contact_us_files/bootstrap-3.3.5/css/bootstrap-theme.css
docs/articles/contact_us_files/bootstrap-3.3.5/css/bootstrap-theme.css.map
docs/articles/contact_us_files/bootstrap-3.3.5/css/bootstrap-theme.min.css
docs/articles/contact_us_files/bootstrap-3.3.5/css/bootstrap.css
docs/articles/contact_us_files/bootstrap-3.3.5/css/bootstrap.css.map
docs/articles/contact_us_files/bootstrap-3.3.5/css/bootstrap.min.css
docs/articles/contact_us_files/bootstrap-3.3.5/css/cerulean.min.css
docs/articles/contact_us_files/bootstrap-3.3.5/css/cosmo.min.css
docs/articles/contact_us_files/bootstrap-3.3.5/css/darkly.min.css
docs/articles/contact_us_files/bootstrap-3.3.5/css/flatly.min.css
docs/articles/contact_us_files/bootstrap-3.3.5/css/fonts/Lato.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/css/fonts/LatoBold.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/css/fonts/LatoItalic.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/css/fonts/NewsCycle.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/css/fonts/NewsCycleBold.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/css/fonts/OpenSans.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/css/fonts/OpenSansBold.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/css/fonts/OpenSansBoldItalic.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/css/fonts/OpenSansItalic.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/css/fonts/OpenSansLight.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/css/fonts/OpenSansLightItalic.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/css/fonts/Raleway.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/css/fonts/RalewayBold.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/css/fonts/Roboto.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/css/fonts/RobotoBold.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/css/fonts/RobotoLight.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/css/fonts/RobotoMedium.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/css/fonts/SourceSansPro.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/css/fonts/SourceSansProBold.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/css/fonts/SourceSansProItalic.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/css/fonts/SourceSansProLight.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/css/fonts/Ubuntu.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/css/journal.min.css
docs/articles/contact_us_files/bootstrap-3.3.5/css/lumen.min.css
docs/articles/contact_us_files/bootstrap-3.3.5/css/paper.min.css
docs/articles/contact_us_files/bootstrap-3.3.5/css/readable.min.css
docs/articles/contact_us_files/bootstrap-3.3.5/css/sandstone.min.css
docs/articles/contact_us_files/bootstrap-3.3.5/css/simplex.min.css
docs/articles/contact_us_files/bootstrap-3.3.5/css/spacelab.min.css
docs/articles/contact_us_files/bootstrap-3.3.5/css/united.min.css
docs/articles/contact_us_files/bootstrap-3.3.5/css/yeti.min.css
docs/articles/contact_us_files/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.eot
docs/articles/contact_us_files/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.svg
docs/articles/contact_us_files/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.ttf
docs/articles/contact_us_files/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.woff
docs/articles/contact_us_files/bootstrap-3.3.5/fonts/glyphicons-halflings-regular.woff2
docs/articles/contact_us_files/bootstrap-3.3.5/js/bootstrap.js
docs/articles/contact_us_files/bootstrap-3.3.5/js/bootstrap.min.js
docs/articles/contact_us_files/bootstrap-3.3.5/js/npm.js
docs/articles/contact_us_files/bootstrap-3.3.5/shim/html5shiv.min.js
docs/articles/contact_us_files/bootstrap-3.3.5/shim/respond.min.js
docs/articles/contact_us_files/header-attrs-2.6/header-attrs.js
docs/articles/contact_us_files/htmlwidgets-1.5.3/htmlwidgets.js
docs/articles/contact_us_files/jquery-1.12.4/jquery.min.js
docs/articles/contact_us_files/leaflet-1.3.1/images/layers-2x.png
docs/articles/contact_us_files/leaflet-1.3.1/images/layers.png
docs/articles/contact_us_files/leaflet-1.3.1/images/marker-icon-2x.png
docs/articles/contact_us_files/leaflet-1.3.1/images/marker-icon.png
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docs/articles/contact_us_files/leaflet-1.3.1/leaflet.js
docs/articles/contact_us_files/leaflet-binding-2.0.3/leaflet.js
docs/articles/contact_us_files/leafletfix-1.0.0/leafletfix.css
docs/articles/contact_us_files/navigation-1.1/codefolding.js
docs/articles/contact_us_files/navigation-1.1/sourceembed.js
docs/articles/contact_us_files/navigation-1.1/tabsets.js
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docs/articles/contact_us_files/rstudio_leaflet-1.3.1/rstudio_leaflet.css
docs/articles/example_lipid_absolute_quantification.html
docs/articles/example_lipid_absolute_quantification_files/header-attrs-2.6/header-attrs.js
docs/articles/get_is_retention_time.html
docs/articles/get_is_retention_time_files/header-attrs-2.6/header-attrs.js
docs/articles/index.html
docs/articles/is_relative_quantification.html
docs/articles/is_relative_quantification_files/header-attrs-2.6/header-attrs.js
docs/articles/is_relative_quantification_files/vembedr-0.1.4.9002/css/vembedr.css
docs/articles/is_relative_quantification_files/vembedr-0.1.4/css/vembedr.css
docs/articles/lipidflow.html
docs/articles/lipidflow_files/header-attrs-2.6/header-attrs.js
docs/articles/one_step_of_lipidflow.html
docs/articles/one_step_of_lipidflow_files/header-attrs-2.6/header-attrs.js
docs/articles/one_step_of_lipidflow_files/vembedr-0.1.4.9002/css/vembedr.css
docs/articles/one_step_of_lipidflow_files/vembedr-0.1.4/css/vembedr.css
docs/articles/output_result.html
docs/articles/output_result_files/header-attrs-2.6/header-attrs.js
docs/articles/overview_of_lipidflow.html
docs/articles/overview_of_lipidflow_files/header-attrs-2.6/header-attrs.js
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/code-color-scheme-dark.css
docs/code-color-scheme-light.css
docs/darkswitch.js
docs/docsearch.css
docs/docsearch.js
docs/docsearch.json
docs/favicon-16x16.png
docs/favicon-32x32.png
docs/favicon.ico
docs/index.html
docs/index.md
docs/link.svg
docs/logo.png
docs/man/figures/15_0-18_1_d7_ DAG_M+H-H2O.html
docs/man/figures/15_0-18_1_d7_ DAG_M+H.html
docs/man/figures/15_0-18_1d7_PA_Na_Salt_M+H.html
docs/man/figures/15_0_18_1_d7_PC.html
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docs/man/figures/2021_02_09_10.19.33_PM.png
docs/man/figures/2021_02_09_10.24.17_PM.png
docs/man/figures/2021_02_09_10.34.21_PM.png
docs/man/figures/Figure_2.jpg
docs/man/figures/Screen Shot 2021-02-09 at 10.14.13 PM.png
docs/man/figures/Screen Shot 2021-02-09 at 10.19.33 PM.png
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docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/preferably.css
docs/reference/Rplot001.png
docs/reference/cal_abs.html
docs/reference/clean_is_table.html
docs/reference/clean_lipid_data.html
docs/reference/combine_pos_neg_quantification.html
docs/reference/combine_quantification_data_and_feature_info.html
docs/reference/extractPeaks2.html
docs/reference/extract_targeted_peaks.html
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docs/reference/figures/15_0-18_1_d7_ DAG_M+H.html
docs/reference/figures/15_0-18_1d7_PA_Na_Salt_M+H.html
docs/reference/figures/15_0_18_1_d7_PC.html
docs/reference/figures/2021_02_09_10.14.13_PM.png
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docs/reference/figures/2021_02_09_10.24.17_PM.png
docs/reference/figures/2021_02_09_10.34.21_PM.png
docs/reference/figures/Figure_2.jpg
docs/reference/figures/Figure_2.png
docs/reference/figures/Screen Shot 2021-02-09 at 10.14.13 PM.png
docs/reference/figures/Screen Shot 2021-02-09 at 10.19.33 PM.png
docs/reference/figures/Screen Shot 2021-02-09 at 10.24.17 PM.png
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docs/reference/figures/msconventor.png
docs/reference/figures/unnamed-chunk-5-1.png
docs/reference/from_quantification_table_to_rt_table.html
docs/reference/from_rt_table_to_is_info.html
docs/reference/generate_sample_info.html
docs/reference/get_IS_RT.html
docs/reference/get_absolute_quantification.html
docs/reference/get_is_quantify_table.html
docs/reference/get_lipid_absolute_quantification.html
docs/reference/get_quantification_data2.html
docs/reference/get_relative_quantification.html
docs/reference/index.html
docs/reference/lipidflow_logo.html
docs/reference/lipidflow_packages.html
docs/reference/match_sample_peak_table_lipid_search.html
docs/reference/organize_result.html
docs/reference/output_result.html
docs/reference/process_mv.html
docs/reference/reorganize_peak_plot.html
docs/reference/showPeak2.html
docs/reference/tidy_lipidsearch_data.html
docs/reference/trans_is_table.html
docs/sitemap.xml
inst/.DS_Store
inst/NEG/.DS_Store
inst/NEG/D25/.DS_Store
inst/NEG/D25/D25_1.mzXML
inst/NEG/D25/D25_2.mzXML
inst/NEG/IS_information.xlsx
inst/NEG/M19/.DS_Store
inst/NEG/M19/M19_1.mzXML
inst/NEG/M19/M19_2.mzXML
inst/NEG/lipid_annotation_table_neg.xlsx
inst/POS/.DS_Store
inst/POS/D25/.DS_Store
inst/POS/D25/D25_1.mzXML
inst/POS/D25/D25_2.mzXML
inst/POS/IS_information.xlsx
inst/POS/M19/.DS_Store
inst/POS/M19/M19_1.mzXML
inst/POS/M19/M19_2.mzXML
inst/POS/lipid_annotation_table_pos.xlsx
lipidflow.Rproj
man/.DS_Store
man/cal_abs.Rd
man/clean_is_table.Rd
man/clean_lipid_data.Rd
man/combine_pos_neg_quantification.Rd
man/combine_quantification_data_and_feature_info.Rd
man/extractPeaks2.Rd
man/extract_targeted_peaks.Rd
man/figures/15_0-18_1_d7_ DAG_M+H-H2O.html
man/figures/15_0-18_1_d7_ DAG_M+H.html
man/figures/15_0-18_1d7_PA_Na_Salt_M+H.html
man/figures/15_0_18_1_d7_PC.html
man/figures/2021_02_09_10.14.13_PM.png
man/figures/2021_02_09_10.19.33_PM.png
man/figures/2021_02_09_10.24.17_PM.png
man/figures/2021_02_09_10.34.21_PM.png
man/figures/Figure_2.jpg
man/figures/Figure_2.png
man/figures/Screen Shot 2021-03-01 at 7.08.01 PM.png
man/figures/figure10.png
man/figures/figure11.png
man/figures/figure12.png
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man/figures/figure9.png
man/figures/figure_3.png
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man/figures/msconventor.png
man/figures/unnamed-chunk-5-1.png
man/from_quantification_table_to_rt_table.Rd
man/from_rt_table_to_is_info.Rd
man/generate_sample_info.Rd
man/get_IS_RT.Rd
man/get_absolute_quantification.Rd
man/get_is_quantify_table.Rd
man/get_lipid_absolute_quantification.Rd
man/get_quantification_data2.Rd
man/get_relative_quantification.Rd
man/lipidflow_logo.Rd
man/lipidflow_packages.Rd
man/match_sample_peak_table_lipid_search.Rd
man/organize_result.Rd
man/output_result.Rd
man/process_mv.Rd
man/reorganize_peak_plot.Rd
man/showPeak2.Rd
man/tidy_lipidsearch_data.Rd
man/trans_is_table.Rd
pkgdown/favicon/apple-touch-icon-120x120.png
pkgdown/favicon/apple-touch-icon-152x152.png
pkgdown/favicon/apple-touch-icon-180x180.png
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pkgdown/favicon/apple-touch-icon.png
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vignettes/.DS_Store
vignettes/absolute_quantification.Rmd
vignettes/contact_us.Rmd
vignettes/get_is_retention_time.Rmd
vignettes/is_relative_quantification.Rmd
vignettes/lipidflow.Rmd
vignettes/one_step_of_lipidflow.Rmd
vignettes/output_result.Rmd
vignettes/overview_of_lipidflow.Rmd
