data_exprs: Expression data from RNA-Seq study
In jbengler/tidyheatmaps: Heatmaps from Tidy Data
data_exprs R Documentation
Expression data from RNA-Seq study
Description
This data was taken form a RNA-Seq study investigating the regulation of genes
in response to central nervous system inflammation.
Usage
data_exprs
Format
A data frame with 800 rows and 9 variables:
- ensembl_gene_id
Ensembl gene id
- external_gene_name
Gene symbol
- sample
Sample name
- expression
Normalized RNA-Seq expression value
- group
Experimental group
- sample_type
Sample type. Either input or IP.
- condition
Condition of sampling. Either healthy or EAE.
- is_immune_gene
Gene is annotated as immune cell gene. Either yes or no.
- direction
Direction of regulation. Either up or down.
Source
data_exprs represents just a small subset of the data aquired in the study.
More details about the study can be found here
Nature Neuroscience, Bassoon proteinopathy drives neurodegeneration in multiple sclerosis
The complete raw data can be downloaded here
Gene Expression Omnibus, study accession GSE104899
jbengler/tidyheatmaps documentation built on Jan. 8, 2025, 7:45 p.m.
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| data_exprs | R Documentation |
Expression data from RNA-Seq study
Description
This data was taken form a RNA-Seq study investigating the regulation of genes in response to central nervous system inflammation.
Usage
data_exprs
Format
A data frame with 800 rows and 9 variables:
- ensembl_gene_id
Ensembl gene id
- external_gene_name
Gene symbol
- sample
Sample name
- expression
Normalized RNA-Seq expression value
- group
Experimental group
- sample_type
Sample type. Either
inputorIP.- condition
Condition of sampling. Either
healthyorEAE.- is_immune_gene
Gene is annotated as immune cell gene. Either
yesorno.- direction
Direction of regulation. Either
upordown.
Source
data_exprs represents just a small subset of the data aquired in the study.
More details about the study can be found here
Nature Neuroscience, Bassoon proteinopathy drives neurodegeneration in multiple sclerosis
The complete raw data can be downloaded here
Gene Expression Omnibus, study accession GSE104899
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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