API for jcalendo/coriell
Convenience Functions for Bioinformatics

Global functions
.clamp Source code
.col2assay Source code
.getRepresentative Source code
GSE161650_de Man page
GSE161650_lc Man page
UMAP Man page Source code
UMAP.data.frame Man page Source code
UMAP.default Source code
UMAP.dist Man page Source code
UMAP.matrix Man page Source code
UMAP.pca Man page Source code
UMAP.prcomp Man page Source code
associate_components Man page Source code
clamp Man page
clr Man page Source code
colmean Man page Source code
dfs2se Man page Source code
distinct_rgb_palette Man page Source code
edger_to_df Man page Source code
env2global Man page Source code
exact_cor_test Man page Source code
geometric_mean Man page Source code
get_axis_limits Man page Source code
horvath_age Man page Source code
impute Man page Source code
jackknifeSE Man page Source code
lerp Man page Source code
list_to_matrix Man page Source code
map_value Man page Source code
meta_de Man page Source code
minmax Man page Source code
outliers_by_iqr Man page Source code
pairwise_fisher_test Man page Source code
pairwise_intersections Man page Source code
panther_go Man page Source code
permutation_correlation_test Man page Source code
permutations Man page Source code
plot_boxplot Man page Source code
plot_boxplot.SummarizedExperiment Man page Source code
plot_boxplot.data.frame Man page Source code
plot_boxplot.default Man page Source code
plot_boxplot.matrix Man page Source code
plot_cor_pairs Man page Source code
plot_density Man page Source code
plot_density.SummarizedExperiment Man page Source code
plot_density.data.frame Man page Source code
plot_density.default Man page Source code
plot_density.matrix Man page Source code
plot_dist Man page Source code
plot_md Man page Source code
plot_parallel Man page Source code
plot_parallel.SummarizedExperiment Man page Source code
plot_parallel.data.frame Man page Source code
plot_parallel.default Man page Source code
plot_parallel.matrix Man page Source code
plot_umap Man page Source code
plot_volcano Man page Source code
quickmap Man page Source code
random_rgb_palette Man page Source code
rank_threshold Man page Source code
rarefy Man page Source code
read_bismark Man page Source code
remove_components Man page Source code
remove_var Man page Source code
remove_var.SummarizedExperiment Man page Source code
remove_var.data.frame Man page Source code
remove_var.default Source code
remove_var.matrix Man page Source code
sample_n_random_cor Man page Source code
simulate_counts Man page Source code
strip_ens Man page Source code
summarize_dge Man page Source code
theme_coriell Man page Source code
jcalendo/coriell documentation built on March 5, 2025, 5:42 a.m.