GSE161650_de: Differential expression results from GSE161650

In jcalendo/coriell: Convenience Functions for Bioinformatics

Differential expression results from GSE161650

Description

A subset of differential expression results comp THZ1 (n=3) vs DMSO (n=3) samples after analysis with edgeR. See Details for citation.

Usage

GSE161650_de

Format

A data frame with 11,002 rows and 6 columns:

feature_id

Gene Symbol

logFC

log2 fold-change THZ1 vs DMSO

unshrunk.logFC

unshrunk log2 fold-change THZ1 vs DMSO

logCPM

Average logCPM across all samples

PValue

Uncorrected PValue

FDR

FDR Adjusted PValue

Details

Jiang B, Gao Y, Che J, Lu W et al. Discovery and resistance mechanism of a selective CDK12 degrader. Nat Chem Biol 2021 Jun;17(6):675-683. PMID: 33753926

Source

<https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE161650>

jcalendo/coriell documentation built on March 5, 2025, 5:42 a.m.