README.md

In jdhayes/moduleInitR: What the package does (short line)

moduleInitR

This is a Basic package to act as a bootstrap for Environment Module System R interface.

The Environment Module System already has an R interface and it works great:

    https://github.com/cea-hpc/modules/blob/master/init/r.R.in

After installation it can typically be found here: /usr/share/Modules/init/r.R. In order to activate it you can do source(/usr/share/Modules/init/r.R) from within R.

However, we wanted a way to push this interface out as a package so that users only have to do load the package instead of use source:

library(moduleInitR)
module('load','samtools')
module('load','bcftools')

jdhayes/moduleInitR documentation built on April 23, 2022, 12:38 a.m.