API for jdidion/geneticsFormats
Methods to read and convert between different file formats used in genetics/genomics.

Global functions
as.HN Source code
as.binary.tree Source code
assn.to.tract.length Source code
bf Source code
bfdp Source code
bim.to.map Source code
convert Source code
deltaK Source code
downsample.pp Source code
downsample.sd Source code
downsample.worst Source code
find.ancestor Source code
find.descendants Source code
find.minimal.subtree Source code
first.col.as.names Source code
g.c.as.n Source code
g.d.as.n Source code
g.i.as.a Source code
g.i.as.h.matrix Source code
g.i.as.h.n Source code
g.i.as.h.n.list Source code
g.i.as.n Source code
g.i.as.v Source code
g.i.as.v.a Source code
g.i.as.v.n Source code
g.n.as.a Source code
g.n.as.h.list Source code
g.n.as.h.matrix Source code
g.n.as.i Source code
g.n.as.v.h.matrix Source code
g.n.as.v.n Source code
g.n.het.as.ambig Source code
geno.as.DNAbin Source code
genome.to.matrix Source code
h.i.as.n Source code
is.minimal.subtree Source code
load.assignments Source code
load.long.format Source code
make.consensus Source code
make.penncnv.file Source code
merge.shapeit Source code
multidist Source code
my.dist Source code
my.dist.wrapper Source code
my.grid.arrange Source code
n.as.ambig Source code
plot.chrm.structure Source code
plot.emmax.projects Source code
plot.fs.windows Source code
plot.lamp.chrm Source code
plot.lamp.genome Source code
plot.lamp.indivs Source code
plot.lamp.summary Source code
plot.probs Source code
plot.tract.lengths Source code
ppa Source code
read.assignments Source code
read.bimbam Source code
read.emmax.projects Source code
read.emmax.results Source code
read.fastlmm Source code
read.plink Source code
read.tree.ade4 Source code
relabel.tree Source code
remove.related Source code
reroot.tree Source code
simulate.snps Source code
skip Source code
split.structure.file Source code
subsample.indivs.hwe Source code
summarize.chrm Source code
summarize.fs Source code
summarize.fs.windows Source code
summarize.fs2 Source code
summarize.structure Source code
summarize.structure.chrm Source code
trim Source code
write.cov.files Source code
write.dist Source code
write.dists Source code
write.fastphase Source code
jdidion/geneticsFormats documentation built on Aug. 21, 2017, 7:25 p.m.