jeffbhasin/snpscope: snpscope: Compute overlap of SNPs with regulatory elements and export to CSV or the UCSC Genome Browser
Version 0.1

Uses shiny to launch a web-based interface to select SNPs and regulatory elements and allows downloading a CSV of element overlaps and provides visualization by creating a UCSC genome browser session using rtracklayer.

Getting started

Package details

AuthorJeffrey Bhasin <[email protected]>
MaintainerJeffrey Bhasin <[email protected]>
LicenseGPL-3
Version0.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("jeffbhasin/snpscope")
jeffbhasin/snpscope documentation built on May 17, 2017, 3:59 p.m.