register_saalfeldlab_registrations: Register Saalfeld Lab registrations with nat.templatebrains

In jefferis/nat.jrcbrains: Janelia Research Campus Bridging Registrations for Drosophila Brains

Register Saalfeld Lab registrations with nat.templatebrains

Description

Register Saalfeld Lab registrations with nat.templatebrains

Usage

register_saalfeldlab_registrations(
  x = getOption("nat.jrcbrains.regfolder"),
  ...
)

Arguments

x	A folder containing downloaded Saalfeld lab registrations
...	Additional arguments passed to add_saalfeldlab_reglist and eventually to add_reglist

Details

You must download the registrations from https://www.janelia.org/open-science/jrc-2018-brain-templates using download_saalfeldlab_registrations. If you prefer you may also download them manually to to a single folder, setting options(nat.jrcbrains.regfolder) to point to this folder in your Rprofile.

Value

A named logical vector indicating which of the subfolders was successfully registered with nat.templatebrains

References

See Bogovic et al. (2018) https://doi.org/10.1101/376384

See Also

download_saalfeldlab_registrations

Examples

## Not run: 
options(nat.jrcbrains.regfolder='/GD/projects/JFRC/JohnBogovic/jrc-2018-brain-templates')
register_saalfeldlab_registrations()

## End(Not run)

jefferis/nat.jrcbrains documentation built on June 28, 2023, 4:06 a.m.