IBNWB: Template information for the Insect Brain Nomenclature Whole...
In jefferislab/nat.flybrains: Additional data for use with the NeuroAnatomy Toolbox (nat)
IBNWB R Documentation
Template information for the Insect Brain Nomenclature Whole Brain reference
brain
Description
A synthetic whole brain constructed from the Insect Brain Nomenclature
template brain. The original confocal stack was duplicated, mirrored about a
vertical axis and then displaced by 392 pixels in x and then merged
with the original, with a linear blend in the overlapping region.
The surface model was constructed in Amira in the Jefferis Lab using a simple
median filter, followed by thresholding and a surface simplification.
Usage
IBNWB
Format
An object of class templatebrain of dimension 905 x 513 x 136.
References
Kei Ito, Kazunori Shinomiya, Masayoshi Ito, J. Douglas Armstrong,
George Boyan, Volker Hartenstein, Steffen Harzsch, Martin Heisenberg, Uwe
Homberg, Arnim Jenett, Haig Keshishian, Linda L. Restifo, Wolfgang
Rössler, Julie H. Simpson, Nicholas J. Strausfeld, Roland
Strauss, Leslie B. Vosshall, Insect Brain Name Working Group (2013). A
systematic nomenclature for the insect brain. Neuron 81 (4), 755-765.
doi:10.1016/j.neuron.2013.12.017
Kei Ito, Kazunori Shinomiya, Masayoshi Ito, J. Douglas Armstrong,
George Boyan, Volker Hartenstein, Steffen Harzsch, Martin Heisenberg, Uwe
Homberg, Arnim Jenett, Haig Keshishian, Linda L. Restifo, Wolfgang
Rössler, Julie H. Simpson, Nicholas J. Strausfeld, Roland
Strauss, Leslie B. Vosshall, Insect Brain Name Working Group (2013). A
systematic nomenclature for the insect brain. Neuron 81 (4), 755-765.
doi:10.1016/j.neuron.2013.12.017
See Also
IBN
Examples
IBNWB
jefferislab/nat.flybrains documentation built on Aug. 16, 2022, 8:54 p.m.
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| IBNWB | R Documentation |
Template information for the Insect Brain Nomenclature Whole Brain reference brain
Description
A synthetic whole brain constructed from the Insect Brain Nomenclature template brain. The original confocal stack was duplicated, mirrored about a vertical axis and then displaced by 392 pixels in x and then merged with the original, with a linear blend in the overlapping region.
The surface model was constructed in Amira in the Jefferis Lab using a simple median filter, followed by thresholding and a surface simplification.
Usage
IBNWB
Format
An object of class templatebrain of dimension 905 x 513 x 136.
References
Kei Ito, Kazunori Shinomiya, Masayoshi Ito, J. Douglas Armstrong, George Boyan, Volker Hartenstein, Steffen Harzsch, Martin Heisenberg, Uwe Homberg, Arnim Jenett, Haig Keshishian, Linda L. Restifo, Wolfgang Rössler, Julie H. Simpson, Nicholas J. Strausfeld, Roland Strauss, Leslie B. Vosshall, Insect Brain Name Working Group (2013). A systematic nomenclature for the insect brain. Neuron 81 (4), 755-765. doi:10.1016/j.neuron.2013.12.017
Kei Ito, Kazunori Shinomiya, Masayoshi Ito, J. Douglas Armstrong, George Boyan, Volker Hartenstein, Steffen Harzsch, Martin Heisenberg, Uwe Homberg, Arnim Jenett, Haig Keshishian, Linda L. Restifo, Wolfgang Rössler, Julie H. Simpson, Nicholas J. Strausfeld, Roland Strauss, Leslie B. Vosshall, Insect Brain Name Working Group (2013). A systematic nomenclature for the insect brain. Neuron 81 (4), 755-765. doi:10.1016/j.neuron.2013.12.017
See Also
IBN
Examples
IBNWB
R Package Documentation
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