clusterFusionEnds: Cluster and annotate a fusion end list
In jefferys/FusionClust: Cluster fusions
Description
Usage
Arguments
Value
Description
Cluster and annotate a fusion end list
Usage
1
clusterFusionEnds(ends, window = 10)
Arguments
ends
A dataframe of fusion ends, sorted.
window
The size of the clustering window, in base pairs. Two fusion
ends where the difference in the last sequenced base position is less than
this will be merged, e.g. if the positions are 10 and 19, a window of 10
will merge these, a window of 9 will not.
Value
The data frame of fusion ends, annotated with the cluster they
belong to (adding columns clusterId, clusterLow, and clusterHigh).
jefferys/FusionClust documentation built on May 22, 2019, 2:39 p.m.
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Description Usage Arguments Value
Description
Cluster and annotate a fusion end list
Usage
1 | clusterFusionEnds(ends, window = 10)
|
Arguments
ends |
A dataframe of fusion ends, sorted. |
window |
The size of the clustering window, in base pairs. Two fusion ends where the difference in the last sequenced base position is less than this will be merged, e.g. if the positions are 10 and 19, a window of 10 will merge these, a window of 9 will not. |
Value
The data frame of fusion ends, annotated with the cluster they belong to (adding columns clusterId, clusterLow, and clusterHigh).
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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