test_data: Some simulated haplotype count data from 1000 individuals and...
In jeinson/tompen: [Sta]tistics for [M]odified [Pen]etrance
test_data R Documentation
Some simulated haplotype count data from 1000 individuals and 500 genes
Description
This file is the result of the simulate_data.R script, saved for faster
bootstrap testing. When simulated, there is no dependence between the coding
allele and the sqtl allele, so the result of the test should be null
Usage
test_data
Format
A data frame with about 15,000 rows and 4 columns
- gene
simulated gene name
- indv
simulated individual name
- haplotype
The simulated haplotype with 'a' and 'A' being high and low included alleles, and 'b' and 'B' being rare and common coding variant alleles.
- qtl_af
The frequency of the 'penetrance driving' QTL qllele. i.e. lower splicing or higher expression allele.
...
jeinson/tompen documentation built on March 18, 2023, 2:59 a.m.
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| test_data | R Documentation |
Some simulated haplotype count data from 1000 individuals and 500 genes
Description
This file is the result of the simulate_data.R script, saved for faster bootstrap testing. When simulated, there is no dependence between the coding allele and the sqtl allele, so the result of the test should be null
Usage
test_data
Format
A data frame with about 15,000 rows and 4 columns
- gene
simulated gene name
- indv
simulated individual name
- haplotype
The simulated haplotype with 'a' and 'A' being high and low included alleles, and 'b' and 'B' being rare and common coding variant alleles.
- qtl_af
The frequency of the 'penetrance driving' QTL qllele. i.e. lower splicing or higher expression allele.
...
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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