plot_rt: Plot the Results of 'estimate_rt()'

In jesse-smith/covidModel: COVID-19 Modeling Tools for Shelby County Health Department

Description

plot_rt() plots the effective reproductive number over the course of the epidemic in Shelby County, along with reference dates and severity levels for comparison. Optionally, supplied unsmoothed Rt estimates to .rough_rt will add points for this estimates to the background for reference.

Usage

plot_rt(.data, start = "2020-04-01", end = Sys.Date(), .rough_rt = NULL)

Arguments

.data	Rt estimates resulting from a call to estimate_rt()
start	The start date of the x axis
end	The end date of the x axis
.rough_rt	Unsmoothed Rt estimates, e.g. as produced by estimate_rt(trend = 1L, boost = FALSE)

Value

A ggplot object

jesse-smith/covidModel documentation built on Feb. 21, 2022, 3:23 p.m.