format_oecosimu_dist: Reformat an oecosimu Object
In jfq3/QsNullModels: My null model functions

Description Usage Arguments Details Value Author(s) References See Also

Reformats an oecosim object if the statistic returned is a distance matrix.

1	format_oecosimu_dist(sol, com)

`sol`	Result of oecosimu when statistic is a matrix.
`com`	Community matrix used to calculate oecosimu result.

Vegan's oecosimu function is used to compare an observed and expected value or values based on a null model. A drawback of the oecosimu summary output is that sample pairs are not named.

This function reformats the oecosimu result into a table giving the names of sample pairs, the observed statistic, the expected statistic and its standard deviation based on the null model, the standard effect size, the selection strength as defined in Zhou et al. (2014), and the probability that the observed and expected values of the statistic are not different. This function is appropriate when the statistic is a distance matrix.

A data frame.

John Quensen

Zhou JZ, Deng Y, Zhang P et al. (2014) Stochasticity, succession, and environmental perturbations in a fluidic ecosystem. Proceedings of the National Academy of Sciences of the United States of America, 111, E836-E845.

format_oecosimu_vector

jfq3/QsNullModels documentation built on April 6, 2020, 2:06 p.m.