Man pages for jgmv/comecol
Community Ecology Analysis
| check_com | Check Consistency in Community Data |
| clim_data | Get Bioclimatic Data For Community Data |
| diversity_com | Calculates Diversity Indices For Communitiy data |
| find_species_range | Find Species' Distribution Ranges |
| host_data | Add Host Phylogenetic Data To Community Data |
| mm_norm | Mixture Model Normalization Of Sequence Reads |
| modify_taxonomy | Modify Taxon Names |
| otu_clustering | Clusters Species By Sequence Similarity |
| phylo_diversity_com | Phylogenetic Diversity Of Communitiy data |
| phylomatic_like | A Phylomatic-like Function |
| plot_vp_euler3 | Plot Euler Diagram From Variation Partition Results (3 Vars) |
| plot_vp_euler4 | Plot Euler Diagram From Variation Partition Results (4 Vars) |
| pool_com | Pool Community Data By Factor |
| preprocess_com | Preprocess Community Data |
| read_com | Community Data Input |
| soil_data | Add Soil Data To Community Data Object |
| spatial_data | Add Geographic Coordinates To Community Data |
| subset_com | Subsets Community Data |
| tax_prop | Proportion of Taxa In Community Data |
| taxtotree | Taxonomy Table To Tree |
| test_vp3 | Significance Testing For Variation Partition (3 Vars) |
| test_vp4 | Significance Testing For Variation Partition (4 Vars) |
