Man pages for jhrcook/KrasAlleleCna
The Allele-Specific CNA Analysis of KRAS in CRC
| allele_data_filt | All data files merged |
| allele_depth_tib | mpileup and ANNOVAR data merged |
| annovar_tib | ANNOVAR results |
| choose_one_filename | Select the best filename to keep |
| cnv_tib | CNA information from TCGA |
| n_unique | Number of unique values |
| parse_annovar_mutation | Parse ANNOVAR mutation |
| parse_vcf | Parse a VCF file |
| plot_genotype_heatmap | Plot genotype heatmaps |
| tidy_tcga_sample_sheet | TCGA Sample Sheet |
