README.md

flowMap

'flowMap' offers a distance metric for mapping cell populations in flow cytometry data. Our metric is distribution-free and can accommodate large number of feature markers. In a typical flow cytometry workflow, cell population mapping is a key process after identifying cell populations in each flow cytometry samples to establish equivalence of the cell populations across samples or to quantify biological similarity between cell types. 'flowMap' is a stand-alone method that can be easily incorporated with any flow cytometry workflow.

Preparing data for 'flowMap'

Updating to the latest version of flowMap

You can track (and contribute to) the development of 'flowMap' at https://github.com/JoyceHsiao/flowMap.

  1. To install the release version of 'flowMap': R source("http://bioconductor.org/biocLite.R") biocLite("flowMap")

  2. To install the development version of 'flowMap': ```R library("devtools") install_github("joycehsiao/flowMap")

# If you don't have 'devtools' installed already install.packages("devtools") library("devtools") install_github("joycehsiao/flowMap") ```



jhsiao999/flowMap documentation built on May 19, 2019, 9:28 a.m.