Man pages for jianan/qtlintv
QTL interval estimation
| addblank | add a gap region into a chr by removing markers. |
| gen_map | generate a mice genetic map with one gape region on CHR |
| gen_pheno_ail | generate pheno for ail data |
| gen_pheno_do | generate pheno from pedigree and xo data. |
| gen_pheno_do_allqtl | generate pheno for all the qtlpositons |
| get_minor_qtl | generate some minor qtls from other Chrs, not X and the QTL... |
| get_minor_qtl_do | generate some minor qtls from other Chrs, not X and the QTL... |
| lod.drop | LOD-drop for lod support interval to reach 95% coverage rate. |
| plotmap | plot map |
| prep_data_founders | prepare for DOQTL::calc.genoprob |
| prep_data_founders_chr | prepare for DOQTL::calc.genoprob |
| qtlintv | qtlintv. |
| qtlsummary.do | summarize of do simulation results |
| run.ail | run simulations for AIL |
| run.do | run simulations for DO type experiments |
| run.do.fixcc | run simulations for DO type experiments, with the same pre-CC... |
| run.do.single | run simulations for DO type experiments |
| simu_snp_do_founder | create fake snps for DO founders, while keeping the same... |
