writeListOfGAlignments: export list of GAlignments into bam files
In jianhong/ATACseqQC: ATAC-seq Quality Control
View source: R/writeListOfGAlignments.R
writeListOfGAlignments R Documentation
export list of GAlignments into bam files
Description
wraper for export to export list of
GAlignment into bam files.
Usage
writeListOfGAlignments(objs, outPath = ".")
Arguments
objs
A list of GAlignments.
outPath
character(1). Output file path.
Value
status of export.
Author(s)
Jianhong Ou
Examples
library(GenomicAlignments)
gal1 <- GAlignments(seqnames=Rle("chr1"), pos=1L, cigar="10M",
strand=Rle(strand(c("+"))), names="a", score=1)
galist <- GAlignmentsList(a=gal1)
writeListOfGAlignments(galist)
jianhong/ATACseqQC documentation built on March 19, 2024, 8:30 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/writeListOfGAlignments.R
| writeListOfGAlignments | R Documentation |
export list of GAlignments into bam files
Description
wraper for export to export list of GAlignment into bam files.
Usage
writeListOfGAlignments(objs, outPath = ".")
Arguments
objs |
A list of GAlignments. |
outPath |
character(1). Output file path. |
Value
status of export.
Author(s)
Jianhong Ou
Examples
library(GenomicAlignments)
gal1 <- GAlignments(seqnames=Rle("chr1"), pos=1L, cigar="10M",
strand=Rle(strand(c("+"))), names="a", score=1)
galist <- GAlignmentsList(a=gal1)
writeListOfGAlignments(galist)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.