topNgRNA: merge the results from multiple folders

In jianhong/CPD: CRISPR/Cas9 gRNA designer

Description

merge multiple on.target.summary.csv into one file

Usage

topNgRNA(output = "topNgRNA.csv", path = ".",
  filename = "on.target.summary.csv", n = 2, cutoffEfficacy = 0,
  cutofftop5OfftargetTotalScore = 5, ...)

Arguments

output	output file of summary file. Default is topNgRNA.csv.
path	Path to be searched. Default is current folder.
filename	file name to be searched. Default is on.target.summary.csv
n	top N gRNAs per file. Default is 2.
cutoffEfficacy	cutoff value of gRNA efficacy value. Default is 0
cutofftop5OfftargetTotalScore	cutoff value of top5OfftargetTotalScore. Default is 5.
...	not used.

Value

a dataframe

jianhong/CPD documentation built on May 4, 2019, 8:40 a.m.