TxDb2GR: TxDb object to GRanges
In jianhong/ChIPpeakAnno: Batch annotation of the peaks identified from either ChIP-seq, ChIP-chip experiments, or any experiments that result in large number of genomic interval data
TxDb2GR R Documentation
TxDb object to GRanges
Description
convert TxDb object to GRanges
Usage
TxDb2GR(ranges, feature, OrganismDb)
Arguments
ranges
an Txdb object
feature
feature type, could be geneModel, gene, exon,
transcript, CDS, fiveUTR, threeUTR, microRNA, and tRNA
OrganismDb
org db object
jianhong/ChIPpeakAnno documentation built on April 28, 2024, 3:10 p.m.
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| TxDb2GR | R Documentation |
TxDb object to GRanges
Description
convert TxDb object to GRanges
Usage
TxDb2GR(ranges, feature, OrganismDb)
Arguments
ranges |
an Txdb object |
feature |
feature type, could be geneModel, gene, exon, transcript, CDS, fiveUTR, threeUTR, microRNA, and tRNA |
OrganismDb |
org db object |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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