permPool: Class '"permPool"'

In jianhong/ChIPpeakAnno: Batch annotation of the peaks identified from either ChIP-seq, ChIP-chip experiments, or any experiments that result in large number of genomic interval data

Class "permPool"

Description

An object of class "permPool" represents the possible locations to do permutation test.

Slots

grs

object of "GRangesList" The list of binding ranges

N

vector of "integer", permutation number for each ranges

Objects from the Class

Objects can be created by calls of the form new("permPool", grs="GRangesList", N="integer").

See Also

preparePool, peakPermTest

jianhong/ChIPpeakAnno documentation built on April 28, 2024, 3:10 p.m.