mul2one: align

Description Usage Arguments Value Examples

Description

alignment multiple fasta files to one template

Usage

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mul2one(fas, template, ...)

Arguments

fas

path to fasta files

template

path to template

...

parameters for pairwiseAlignment.

Value

Returns a list of PairwiseAlignments object.

Examples

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path <- system.file("extdata", package="multi2one")
fas <- dir(path, "^Seq", full.names = TRUE)
template <- file.path(path, "p5E_MCS_UbiP.fa")
mul2one(fas, template)

jianhong/multi2one documentation built on May 31, 2019, 6:42 p.m.