cell_lines_all: Get all cell-line elements from Cellosaurus xml dataset

In jimvine/rcellosaurus: Cellosaurus for R

Description

Having read a Cellosaurus dataset with read_cellosaurus_xml, this function extracts all the cell-line elements as an xml_nodeset.

Usage

cell_lines_all(cellosaurus)

Arguments

cellosaurus

An XML document containing the Cellosaurus dataset.

Details

Once you have used this function, you will typically want to use cell_lines_filter to find the cell-lines that are of interest to you.

Value

An XML nodeset containing all cell-lines in the dataset.

Examples

cellosaurus <- read_cellosaurus_xml(system.file("extdata",
                                                "cellosaurus.xml",
                                                package = "rcellosaurus"))
cell_lines <- cell_lines_all(cellosaurus)

jimvine/rcellosaurus documentation built on May 14, 2019, 8:04 a.m.