make_table_one: Make Table One
In jjwillard/wfbmcphsr: WFBMC Public Health Sciences

Description Usage Arguments Value Examples

This function allows you to make a Table One for manuscript publication in the Public Health Sciences

make_table_one(df, grouping_var, num_vars = NULL, num_display = "PM",
  binary_cat_vars = NULL, multiple_cat_vars = NULL,
  cat_display = "CP", subgroups_m = NULL,
  mean_vars_for_subgroups = NULL, subgroups_c = NULL,
  count_vars_for_subgroups = NULL, order_of_vars = NULL,
  export_rtf = FALSE, rtf_filename = NULL, show_pval = TRUE,
  digits = 2)

`df`	Dataset containing covariates
`grouping_var`	Variable to group by (will be columns of table)
`num_vars`	Vector of numeric variables
`num_display`	How should numeric variable results be displayed? ('PM' for mean +- sd, 'PRS' for mean (sd))
`binary_cat_vars`	Vector of binary variables (in 0-1 format)
`multiple_cat_vars`	Vector of multiple level categorical variables
`cat_display`	How to display results: 'CP' = counts and proportions, 'C' = counts, 'P' = proportions (defaults to 'CP')
`subgroups_m`	Vector of subgroup variables of interest (must be factors). NOTE: If you plan to analyze a categorical variable by itself and then also use it for subgroup analysis, it is advised to copy and rename the columns of the categorical variables you wish to use as subgroups (ie. rename variable to something like 'variable_sub“) so Table One can be properly sorted to reflect your specification in 'order_of_vars'. If the subgroup does not have a unique name, it will be sorted directly below the categorical variable.
`mean_vars_for_subgroups`	Vector of numeric variables from which to calculate mean and sd (must match vector position of corresponding subgroup variable)
`subgroups_c`	Subgroup variable of interest (must be factor, same naming suggestion as in 'subgroups_m“ above)
`count_vars_for_subgroups`	Factor variable from which to calculate counts and proportions
`order_of_vars`	A vector of all variables listed in the order of the rows you desire for your Table One.
`export_rtf`	Logical. Do you want to export an RTF to location specified in 'rtf_filename'?
`rtf_filename`	Must be quoted and include '.rtf' extension (See example)
`show_pval`	Logical. Should the p-value results be displayed?
`digits`	Number of digits to round decimals

A sorted Table One including numeric, categorical and subgroup variables

## Not run: 
make_table_one(df = obpv_baseline, grouping_var = obpv_quintile, num_vars = num_vars,
binary_cat_vars = binary_cat_vars, multiple_cat_vars = multiple_cat_vars, display = 'CP',
subgroups_m = subgroups_m, mean_vars_for_subgroups = mean_vars, subgroups_c = subgroups_c, count_vars_for_subgroups = count_vars,
order_of_vars = var_order, export_rtf = TRUE, rtf_filename = 'my_location/my_filename.rtf', show_pval = TRUE, digits = 2)

## End(Not run)