dosim: generatedata

In jlakkis/mnnsim: Perform Simulations to Compare Various Batch Correction Methods

Description

generatedata

Usage

dosim(nsim, ncells, ngenes, xmus, xsds, ymus, ysds, prop1, prop2,
  keep = F, cutoff = 5, ncore, s.seed, dgeneratedata = generatedata,
  ddocluster = docluster)

Arguments

nsim	number of simulations
ncells	number of single-cells
ngenes	number of genes
xmus	low-d x-means
xsds	low-d x-sds
ymus	low-d y-means
ysds	low-d y-sds
prop1	batch 1 cell type proportions
prop2	batch 2 cell type proportions
keep	whether to keep "low-quality" replicates
cutoff	criterion for determining whether a replicate is low-quality
ncore	number of cores for parallel computing
s.seed	rng seed
dgeneratedata	technical argument
ddocluster	technical argument

jlakkis/mnnsim documentation built on Jan. 21, 2020, 1:21 a.m.