jlw-ecoevo/gRodon: Inference of prokaryotic growth rates with codon usage statistics
This package infers growth rates of prokaryotic organisms by calculating several codon usage statistics on a user-provided set of highly expressed genes and the genome at large. In particular, it uses the MILC statistic from the coRdon package as well as the codon pair bias (Coleman et al. 2008).
Getting started
Browse package contents
Package details |
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| Maintainer | |
| License | use_mit_license() |
| Version | 1.0.0 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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