Description Usage Arguments Value Examples
geoChina
will download the expression matrix and phenotype data as an object in ExpressionSet format
from cloud in mainland China, so it will be a little fast for users in mainland China.
So far, only tencent mirror for our geoChina.
it's just a alternative method for getGEO function from GEOquery package.
geoChina('GSE1009') is the same as eSet=getGEO('GSE1009', getGPL = F)
1 | geoChina(gse = "GSE2546", mirror = "tencent")
|
gse |
input GSE id, such as GSE1009, GSE2546, default:GSE2546 |
a list of ExpressionSet, which contains the expression matrix and phenotype data
1 2 3 |
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