pretty_tbl_df: Create a pretty table from a dataframe to pass to Kable for...

In joelewis101/blantyreSepsis: Data and code for analysis of sepsis aetiology and outcome in Blantyre, Malawi

Description

Take a dataframe and make a new summary dataframe to pass to Kable for pretty table rendering. The input is assumed to have variables in columns with observations in rows.Numeric variables are by default summarised by median and IQR. Character vectors are assumed to be factors and a summarised as a proportion for each level.

Usage

pretty_tbl_df(
  df,
  vars_to_char = NULL,
  r = 0,
  vars_to_specify_rounding = NULL,
  confint = TRUE
)

Arguments

df	dataframe to make into pretty table
vars_to_char	character vector of names of numeric variables that you want to treat as factors
r	numeric, number of digits to round to
vars_to_specify_rounding	named numeric vector c("varname" = m) to hange default rounding for variable varname
confint	boolean, do you want to report confidence intervals?

Value

A dataframe with three columns: variable: the original column name levels: the levels of a character variable (one row for each) level OR the text "Median (IQR)" for numeric variables value: the proportion of observations for that level OR median (IQR) for numeric variables

Examples

pretty_tbl_df(mtcars)

joelewis101/blantyreSepsis documentation built on Aug. 30, 2021, 11:16 p.m.