joey711/biom: An interface package (beta) for the BIOM file format.

This is an R package for interfacing with the BIOM format. This package includes basic tools for reading biom-format files, accessing and subsetting data tables from a biom object (which is more complex than a single table), as well as limited support for writing a biom-object back to a biom-format file. The design of this API is intended to match the python API and other tools included with the biom-format project, but with a decidedly "R flavor" that should be familiar to R users. This includes S4 classes and methods, as well as extensions of common core functions/methods.

Getting started

Package details

AuthorPaul J. McMurdie <[email protected]> and Joseph Paulson <[email protected]>
MaintainerPaul J. McMurdie <[email protected]>
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
joey711/biom documentation built on May 18, 2017, 3:39 a.m.