Man pages for jordanaron22/PartiallyObservedHMM
HMM for Partiall Observed Three Diagnostic Test Data
| BackwardLinear | Adapted Backward Algorithm |
| BackwardLinearRaff | Adapted Backward Algorithm for Partially Observed Data and... |
| CalcClassificationLin | Estimates Classification Probabilities |
| CalcClassificationLinRaff | Estimates Classification Probabilities for Rafferty Method |
| CalcInitialLin | Estimates Initial Probabilities |
| CalcInitialLinRaff | Estimates Initial Probabilities for Rafferty Method |
| CalcLikelihoodMover | Calculates Likelihood of Movers |
| CalcLikelihoodStayer | Calculates Likelihood of Stayers |
| CalcStayerLin | Estimates Stayer Proportion |
| CalcTransitionLin | Estimates Transition Probabilities |
| CalcTransitionLinRaff | Estimates Transition Probabilities for Rafferty Method |
| Classification | Classifies observed given truth |
| CombineandPattern | Combines three tests and patternizes them |
| Combiner | Combines three data matrices |
| CompleteDataLogLikelihood | Expected Value of Complete Data Log Likelihood Given First... |
| EM | Runs EM Algorithm |
| EMRaff | Runs EM Algorithm for Rafferty Method |
| ForwardLinear | Adapted Forward Algorithm |
| ForwardLinearRaff | Adapted Forward Algorithm for Partially Observed Data and... |
| GenerateData | Generates Simulated Latent Data |
| GenerateDataRaff | GenerateData() for Rafferty Method |
| GenerateObs | Generates Simulated Observed Data |
| GenerateSimulatedData | Generates Simulated Data |
| GenerateSimulatedDataRaff | Generates Simulated Data for Rafferty Method |
| GetClass | Standard Classification Matrix |
| GetInit | Standard Initial vector |
| GetInitRaff | Standard Initial Matrix for Rafferty Method |
| GetInitTrue | Calculates True Intial Probabilities |
| GetInitTrueRaff | Calculates True Intial Probabilities for Rafferty Method |
| GetPatterns | Patternizes Data |
| GetTran | Standard Transition Matrix |
| GetTranTrue | Calculates True Transiition Probabilities |
| GetTranTrueRaff | Calculates True Transiition Probabilities for Rafferty Method |
| IntroduceMissing | Introduces Misisng data |
| IntroduceMissingAll | Introduced Missing Data |
| IntroduceMissingColpo | Introduces Misisng data |
| IntroducePersistence | Introduces Persistence |
| Normalize | Normalized Matrices |
| numOfStates | Returns Number of states |
| Pattern2Data | Turns patterns into data array |
| persitenceHelper | Helper Function for IntroducePersistence |
| ProdClass | Calculates Probability Latent Values are 0 given observed... |
| Seperator | Seperates Three Tests |
| StateCalculator | Calculates State Given Individual Test Results |
