ForwardLinear: Adapted Forward Algorithm

In jordanaron22/PartiallyObservedHMM: HMM for Partiall Observed Three Diagnostic Test Data

Description

Adapted forward that incorporates partially observed data. Partial data is resolved in linear time.

Usage

ForwardLinear(data, time, init, tran, class, max2, max3)

Arguments

data	two dimensional matrix for individual. 1st dimension is time 2nd is partially observed data
time	what time to caluclate for. Works recursivly, if time = t calculates for all values less than t
init	initial probabilities
tran	transition probabilities
class	classification probabilities
max2	number of values the second test can take on
max3	number of values the third test can take on

Value

list (each individual) of list (each time) of list (each partially observed data) of vector (forward probabilities)

jordanaron22/PartiallyObservedHMM documentation built on May 21, 2020, 6:49 p.m.