package_config.R

# package config
#install.packages(c("devtools", "roxygen2", "testthat", "knitr"))
#devtools::install_github("r-lib/devtools")
library(devtools)
use_package('data.table',type = "Imports",min_version = T)
use_package('stringr',type = "Imports",min_version = T)
use_package('parallel',type = "Imports",min_version = T)
# use_package('ggplot2',type = "Imports",min_version = T)
# use_package('dplyr',type = "Imports",min_version = T)
use_package('gt',type = "Imports",min_version = T)

use_data_raw()

# some data
usethis::use_data(pbs_background, compress = 'xz',overwrite = TRUE)
usethis::use_data(eastern_candidates, compress = 'xz',overwrite = TRUE) 
usethis::use_data(central_candidates, compress = 'xz',overwrite = TRUE)
usethis::use_data(internal_background_focal, compress = 'xz',overwrite = TRUE)
usethis::use_data(internal_background_5kb, compress = 'xz',overwrite = TRUE)
usethis::use_data(internal_candidates_focal, compress = 'xz',overwrite = TRUE)
usethis::use_data(internal_candidates_5kb, compress = 'xz',overwrite = TRUE)
usethis::use_data(internal_candidates_0.5, compress = 'xz',overwrite = TRUE)
usethis::use_data(internal_candidates_0.1, compress = 'xz',overwrite = TRUE)
usethis::use_data(internal_candidates_0.05, compress = 'xz',overwrite = TRUE)
usethis::use_data(genes, compress = 'xz',overwrite = TRUE)
usethis::use_data(genes_2kb, compress = 'xz',overwrite = TRUE)
usethis::use_data(kegg_long, compress='xz',overwrite = TRUE)
joshuamschmidt/multiPermr documentation built on Oct. 12, 2020, 11:42 a.m.