README.md

In jotsetung/EnsDb.Hsapiens.v75: Ensembl based annotation package

EnsDb.Hsapiens.v75

Package providing the EnsDb database for human gene and protein annotations defined in Ensembl version 75. This package depends on Bioconductor's ensembldb package (official version at http://www.bioconductor.org/packages/ensembldb, development version at https://github.com/jotsetung/ensembldb). See https://github.com/jotsetung/ensembldb/blob/master/vignettes/ensembldb.Rmd for a detailed description how to use the package.

Installation

Ideally, this package should be installed from Bioconductor:

library(BiocInstaller)
biocLite("EnsDb.Hsapiens.v75")

In addition it is possible to install the development version of the package directly from github by first cloning the repository (git-lfs, i.e. git large file storage should be installed on the system in order to fetch the SQLite database file). The package can then be build with R CMD build EnsDb.Hsapiens.v75 and finally installed with R CMD INSTALL EnsDb.Hsapiens.v75_*.

jotsetung/EnsDb.Hsapiens.v75 documentation built on May 19, 2019, 9:41 p.m.