runEnsDbApp: Search annotations interactively

In jotsetung/ensembldb: Utilities to create and use Ensembl-based annotation databases

Search annotations interactively

Description

This function starts the interactive EnsDb shiny web application that allows to look up gene/transcript/exon annotations from an EnsDb annotation package installed locally.

Usage

	runEnsDbApp(...)

Arguments

...	Additional arguments passed to the runApp function from the shiny package.

Details

The shiny based web application allows to look up any annotation available in any of the locally installed EnsDb annotation packages.

Value

If the button Return & close is clicked, the function returns the results of the present query either as data.frame or as GRanges object.

Author(s)

Johannes Rainer

See Also

EnsDb, genes

jotsetung/ensembldb documentation built on Nov. 24, 2023, 7:21 a.m.