go_enrichment: Perform gene ontology enrichment analysis
In jpquast/protti: Bottom-Up Proteomics and LiP-MS Quality Control and Data Analysis Tools
View source: R/calculate_go_enrichment.R
go_enrichment R Documentation
Perform gene ontology enrichment analysis
Description
![[Deprecated]](../help/figures/lifecycle-deprecated.svg)
This function was deprecated due to its name changing to calculate_go_enrichment().
Usage
go_enrichment(...)
Value
A bar plot displaying negative log10 adjusted p-values for the top 10 enriched or
depleted gene ontology terms. Alternatively, plot cutoffs can be chosen individually with the
plot_cutoff argument. Bars are colored according to the direction of the enrichment
(enriched or deenriched). If plot = FALSE, a data frame is returned. P-values are
adjusted with Benjamini-Hochberg.
jpquast/protti documentation built on June 9, 2024, 10:40 a.m.
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View source: R/calculate_go_enrichment.R
| go_enrichment | R Documentation |
Perform gene ontology enrichment analysis
Description
This function was deprecated due to its name changing to calculate_go_enrichment().
Usage
go_enrichment(...)
Value
A bar plot displaying negative log10 adjusted p-values for the top 10 enriched or
depleted gene ontology terms. Alternatively, plot cutoffs can be chosen individually with the
plot_cutoff argument. Bars are colored according to the direction of the enrichment
(enriched or deenriched). If plot = FALSE, a data frame is returned. P-values are
adjusted with Benjamini-Hochberg.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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