Files in jpromeror/EventPointer
An effective identification of alternative splicing events using junction arrays and RNA-Seq data

.DS_Store
.gitignore
DESCRIPTION
NAMESPACE
NEWS
R/AllEvents_RNASeq.R R/AllEvents_RNASeq_MP.R R/ArrayDatamultipath.R R/ArraysData.R R/AuxFunctions.R R/CDFfromGTF.R R/CDFfromGTF_Multipath.R R/EventDetection.R R/EventDetectionMultipath.R R/EventPointer.R R/EventPointer_IGV.R R/EventPointer_RNASeq.R R/EventPointer_RNASeq_IGV.R R/EventPointer_RNASeq_TranRef.R R/EventXtrans.R R/EventsGTFfromTrancriptomeGTF.R R/GetPSI_FromTranRef.R R/PSI_Statistic.R R/PSIss.R R/PrepareBam_EP.R R/SG_RNASeq.R R/getbootstrapkallisto.R README.md
data/AllEvents_RNASeq.rda
data/AllEvents_RNASeq_MP.rda
data/ArrayDatamultipath.rda
data/ArraysData.rda
data/EventXtrans.rda
data/PSIss.rda
data/SG_RNASeq.rda
inst/CITATION
inst/extdata/DONSON.gtf
inst/extdata/EventsFound.txt
inst/extdata/EventsFound_RNASeq.txt
inst/extdata/FBXO31.gtf
inst/extdata/Junction_Probes.txt
inst/extdata/PSR_Probes.txt
inst/extdata/gencode.v24.ann_2genes.gtf
inst/extdata/output/ERR315326/abundance.h5
inst/extdata/output/ERR315326/abundance.tsv
inst/extdata/output/ERR315326/run_info.json
inst/extdata/output/ERR315400/abundance.h5
inst/extdata/output/ERR315400/abundance.tsv
inst/extdata/output/ERR315400/run_info.json
inst/extdata/output/ERR315407/abundance.h5
inst/extdata/output/ERR315407/abundance.tsv
inst/extdata/output/ERR315407/run_info.json
inst/extdata/output/ERR315494/abundance.h5
inst/extdata/output/ERR315494/abundance.tsv
inst/extdata/output/ERR315494/run_info.json
inst/unitTests/test_AuxFunctions.R inst/unitTests/test_CDFfromGTF.R inst/unitTests/test_EventDetection.R inst/unitTests/test_EventDetectionMultipath.R inst/unitTests/test_EventPointer.R inst/unitTests/test_EventPointer_IGV.R inst/unitTests/test_EventPointer_RNASeq.R inst/unitTests/test_EventPointer_RNASeq_IGV.R inst/unitTests/test_EventPointer_RNASeq_TranRef.R inst/unitTests/test_EventsGTFfromTrancriptomeGTF.R inst/unitTests/test_GetPSI_FromTranRef.R inst/unitTests/test_PSI_Statistic.R inst/unitTests/test_getbootstrapkallisto.R man/AllEvents_RNASeq.Rd man/AllEvents_RNASeq_MP.Rd man/ArrayDatamultipath.Rd man/ArraysData.Rd man/CDFfromGTF.Rd man/CDFfromGTF_Multipath.Rd man/EventDetection.Rd man/EventDetectionMultipath.Rd man/EventPointer.Rd man/EventPointer_IGV.Rd man/EventPointer_RNASeq.Rd man/EventPointer_RNASeq_IGV.Rd man/EventPointer_RNASeq_TranRef.Rd man/EventXtrans.Rd man/EventsGTFfromTrancriptomeGTF.Rd man/GetPSI_FromTranRef.Rd man/InternalFunctions.Rd man/PSI_Statistic.Rd man/PSIss.Rd man/PrepareBam_EP.Rd man/SG_RNASeq.Rd man/getbootstrapkallisto.Rd tests/runTests.R
vignettes/Esquema_bis.png
vignettes/EventPointer.Rmd
vignettes/Figure1.png
vignettes/Figure10.png
vignettes/Figure2.png
vignettes/Figure3.png
vignettes/Figure5.png
vignettes/Figure6.png
vignettes/Figure8.png
vignettes/Figure9.png
vignettes/Romero_Fig1.png
vignettes/Thumbs.db
jpromeror/EventPointer documentation built on Oct. 18, 2018, 10:19 p.m.